PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr2P04590_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family BES1
Protein Properties Length: 575aa    MW: 64506.9 Da    PI: 4.9059
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr2P04590_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82254.74.2e-17110547134
                 DUF822  47 nneVlkALcreAGwvvedDGttyr.....kgskpl....eeaeaagssasaspesslq.sslkssalaspvesysaspksssfpspss 124
                            +n+Vl+AL+reAGw+ve+DGtt+r     ++s p       + +   +  +s  s+l+ +slk++++++ ++s++a ++ ++++sp+s
  GSMUA_Achr2P04590_001   1 MNDVLAALAREAGWIVEPDGTTFRpspapASSIPAapppPPPTQLAPFPIRSSDSPLSaTSLKNCSIKASLDSQAALLRIDESLSPTS 88 
                            7***********************5555522222233345666777777899999999999*************************** PP

                 DUF822 125 ldsislasa.......a 134
                            +dsi +a+        a
  GSMUA_Achr2P04590_001  89 FDSIVVAERdiksekyA 105
                            ****9998755544443 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.4E-171111IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514457.73E-154134568IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.806.4E-166135569IPR013781Glycoside hydrolase, catalytic domain
PfamPF013733.3E-82157531IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.3E-55172186IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.3E-55193211IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.3E-55215236IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.3E-55308330IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.3E-55381400IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.3E-55415431IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.3E-55432443IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.3E-55450473IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.3E-55488510IPR001554Glycoside hydrolase, family 14
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 575 aa     Download sequence    Send to blast
MNDVLAALAR EAGWIVEPDG TTFRPSPAPA SSIPAAPPPP PPTQLAPFPI RSSDSPLSAT  60
SLKNCSIKAS LDSQAALLRI DESLSPTSFD SIVVAERDIK SEKYANASPI NSPDCVGHDQ  120
LMRESTDHKA NYVGTSYVPV YAALTSGIIN SYCQLVNPEA VRQELRHLKS LSVDGVVVDC  180
WWGIVEGWSP CKYNWSGYRE LFTILQEFEL KLQVVMAFHE NGGNGSGDMP ISLPKWVLEI  240
GKDNQDIFFT DREGRRNMEC LSWGIDKERV LKGRTGIEVC YDFMRSFRTE FGDLFEEGLI  300
SAIEIGLGAS GELKYPSFPE RMGWRYPGIG EFQCYDKYMQ KNLRLAAQSR GHLFWARGPD  360
NAGHYNLRPD ETGFFCDKGD YDSYYGRFFL HWYAQTLIDH ADQILSLTNL ALEGTEIIAK  420
IPAIYWWYRT ASHAAELTAG FHNPTNQDGY ASIFNMLKKH SVTIKFMCCG PQASMQENEE  480
ALADAEALSW QVLNTAWESG LRVAAQSTLP CDVRETYTKI LEIAKPRNDP DRHLLSFFTF  540
QQQLSPIIIQ REMFLSDLDN FIKCMHGEAG NDVQG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1v3i_A1e-12213656810444Beta-amylase
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00543DAPTransfer from AT5G45300Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009384530.10.0PREDICTED: beta-amylase 8
SwissprotQ9FH800.0BAM8_ARATH; Beta-amylase 8
TrEMBLM0S5500.0M0S550_MUSAM; Beta-amylase
STRINGGSMUA_Achr2P04590_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21413663
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45300.10.0beta-amylase 2